Maximum likelihood tree models for oncogenesis

Documentation for package ‘oncomodel’ version 0.8

comp.freq	Compare Model Probabilities to Frequencies
convert	Converts Matrix to Newick Format
is.tree	Compare with Tree Format
kidney	Cytogenetic data from kidney carcinoma
MLparameters	Compute Maximum Likelihood Parameters
MLtopology	Compute Maximum Likelihood Tree Topology
mrca	Most Recent Common Ancestor
subtree	Subtree